Posts

Our work on Tomographical reconstruction of sequencing based technologies is now on the biorxiv. Enjoy!

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Dimitri Lallement joins the lab for a Masters thesis project. He is enrolled in the Computer Science Engineering program, ENSIMAG at Grenoble and doing a exchange with EPFL. He has studied his Bachelor at the University of Bordeaux and studied as Data Scientist Junior at CNES. He wants to face challenging research problem and explore new methods that can help the interpretation of single-cell RNAseq datasets. Welcome Dimitri!

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Halima Schede joins the lab for a Masters project. She is enrolled in the Bioengineering program and has studied in biology and mathematics at McGill. With her passion for machine learning and neural networks and her knowledge of anatomy and genetics she will turn a bunch of omics data in useful insights of the molecular anatomy of the brain. Welcome Halima!

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Anurag Ranjak joins the lab for a Masters project. Anurag is a Chemical Engineer with industry experience in software engineering. He will adventure in spatial transcriptpomics and image reconstruction.He recently “converted” to biology and enrolled in EPFL Masters in Life Sciences. Welcome Anurag!

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Our work on RNA velocity, the time derivative of gene expression, is now out in Nature. A lot of interesting new evidence and analysis added to the initial bioarxiv preprint. We put great attention to feature possibilities and the limits of the estimation approach. velocyto software is mature and ready to use. Enjoy!

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Over the last few days I have been at the École Polytechnique Fédérale de Lausanne (EPFL) Lausane, Switzerland. The reason of this little trip is that EPFL recently opened a special position at their School of Life Sciences….

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Congratulations to Lars and Simone! This week Simone Codelluppi and Lars Borm, in our lab have been releasing to the world their creation: osmFISH, a fantastic technique they have been optimizing to perfection! I really reccomand to read the preprint here

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Congratulations to Lars and Simone! This week Simone Codelluppi and Lars Borm, in our lab have been releasing to the world their creation: osmFISH, a fantastic technique they have been optimizing to perfection! I really reccomand to read the preprint here

CONTINUE READING

Congratulations to Lars and Simone! This week Simone Codelluppi and Lars Borm, in our lab have been releasing to the world their creation: osmFISH, a fantastic technique they have been optimizing to perfection! I really reccomand to read the preprint here

CONTINUE READING

Congratulations to Lars and Simone! This week Simone Codelluppi and Lars Borm, in our lab have been releasing to the world their creation: osmFISH, a fantastic technique they have been optimizing to perfection! I really reccomand to read the preprint here

CONTINUE READING